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Bioconductor - smokingMouse

This is the released version of smokingMouse; for the devel version, see smokingMouse.

Bioconductor version: Release (3.21)

This is an ExperimentHub package that provides access to the data generated and analyzed in the [smoking-nicotine-mouse](https://github.com/LieberInstitute/smoking-nicotine-mouse/) LIBD project. The datasets contain the expression data of mouse genes, transcripts, exons, and exon-exon junctions across 208 samples from pup and adult mouse brain, and adult blood, that were exposed to nicotine, cigarette smoke, or controls. They also contain relevant metadata of these samples and gene expression features, such QC metrics, if they were used after filtering steps and also if the features were differently expressed in the different experiments.

Author: Daianna Gonzalez-Padilla [aut, cre] ORCID: 0009-0005-8348-3195

Maintainer: Daianna Gonzalez-Padilla <glezdaianna at gmail.com>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("smokingMouse")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("smokingMouse")

Follow Installation instructions to use this package in your R session.

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