This is the released version of microbiomeDataSets; for the devel version, see microbiomeDataSets.
Experiment Hub based microbiome datasetsBioconductor version: Release (3.21)
microbiomeDataSets is a collection of microbiome datasets loaded from Bioconductor'S ExperimentHub infrastructure. The datasets serve as reference for workflows and vignettes published adjacent to the microbiome analysis tools on Bioconductor. Additional datasets can be added overtime and additions from authors are welcome.
Author: Leo Lahti [cre, aut] ORCID: 0000-0001-5537-637X , Felix G.M. Ernst [aut] ORCID: 0000-0001-5064-0928 , Sudarshan Shetty [aut] ORCID: 0000-0001-7280-9915 , Chouaib Benchraka [ctb] ORCID: 0000-0002-1167-7848 , Yagmur Simsek [ctb]
Maintainer: Leo Lahti <leo.lahti at iki.fi>
Citation (from within R, entercitation("microbiomeDataSets")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("microbiomeDataSets")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("microbiomeDataSets")Follow Installation instructions to use this package in your R session.
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