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Category

This is the released version of Category; for the devel version, see Category.

Category Analysis

Bioconductor version: Release (3.21)

A collection of tools for performing category (gene set enrichment) analysis.

Author: Robert Gentleman [aut], Seth Falcon [ctb], Deepayan Sarkar [ctb], Robert Castelo [ctb], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("Category")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Category")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Category")

Details biocViews Annotation, GO, GeneSetEnrichment, Pathways, Software Version 2.74.0 In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years) License Artistic-2.0 Depends methods, stats4, BiocGenerics, AnnotationDbi, Biobase, Matrix Imports utils, stats, graph, RBGL, GSEABase, genefilter, annotate, DBI System Requirements URL See More Suggests EBarrays, ALL, Rgraphviz, RColorBrewer, xtable (>= 1.4-6), hgu95av2.db, KEGGREST, karyoploteR, geneplotter, limma, lattice, RUnit, org.Sc.sgd.db, GOstats, GO.db Linking To Enhances Depends On Me GOstats Imports Me categoryCompare, GmicR, interactiveDisplay, meshr, miRLAB, phenoTest, scTensor Suggests Me qpgraph, RnBeads, maGUI Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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