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Bioconductor - spkTools

spkTools

This is the released version of spkTools; for the devel version, see spkTools.

Methods for Spike-in Arrays

Bioconductor version: Release (3.21)

The package contains functions that can be used to compare expression measures on different array platforms.

Author: Matthew N McCall <mccallm at gmail.com>, Rafael A Irizarry <rafa at jhu.edu>

Maintainer: Matthew N McCall <mccallm at gmail.com>

Citation (from within R, enter citation("spkTools")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("spkTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spkTools")
spkTools: Spike-in Data Analysis and Visualization PDF R Script Reference Manual PDF Details biocViews Microarray, Software, Technology Version 1.64.0 In Bioconductor since BioC 2.4 (R-2.9) (16 years) License GPL (>= 2) Depends R (>= 2.7.0), Biobase(>= 2.5.5) Imports Biobase(>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils System Requirements URL http://bioconductor.org See More Suggests xtable Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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