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pandaR

This is the released version of pandaR; for the devel version, see pandaR.

PANDA Algorithm

Bioconductor version: Release (3.21)

Runs PANDA, an algorithm for discovering novel network structure by combining information from multiple complementary data sources.

Author: Dan Schlauch, Joseph N. Paulson, Albert Young, John Quackenbush, Kimberly Glass

Maintainer: Joseph N. Paulson <paulson.joseph at gene.com>, Dan Schlauch <dschlauch at genospace.com>

Citation (from within R, enter citation("pandaR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("pandaR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("pandaR")

Details biocViews GeneExpression, GeneRegulation, GraphAndNetwork, Microarray, Network, NetworkInference, Software, StatisticalMethod, Transcription Version 1.40.0 In Bioconductor since BioC 3.1 (R-3.2) (10 years) License GPL-2 Depends R (>= 3.0.0), methods, Biobase, BiocGenerics Imports matrixStats, igraph, ggplot2, grid, reshape, plyr, RUnit, hexbin System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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