This is the released version of mobileRNA; for the devel version, see mobileRNA.
mobileRNA: Investigate the RNA mobilome & population-scale changesBioconductor version: Release (3.21)
Genomic analysis can be utilised to identify differences between RNA populations in two conditions, both in production and abundance. This includes the identification of RNAs produced by multiple genomes within a biological system. For example, RNA produced by pathogens within a host or mobile RNAs in plant graft systems. The mobileRNA package provides methods to pre-process, analyse and visualise the sRNA and mRNA populations based on the premise of mapping reads to all genotypes at the same time.
Author: Katie Jeynes-Cupper [aut, cre] ORCID: 0009-0000-1350-1371 , Marco Catoni [aut] ORCID: 0000-0002-3258-2522
Maintainer: Katie Jeynes-Cupper <kej031 at student.bham.ac.uk>
Citation (from within R, entercitation("mobileRNA")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("mobileRNA")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mobileRNA")Follow Installation instructions to use this package in your R session.
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