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Bioconductor - metabolomicsWorkbenchR

metabolomicsWorkbenchR

This is the released version of metabolomicsWorkbenchR; for the devel version, see metabolomicsWorkbenchR.

Metabolomics Workbench in R

Bioconductor version: Release (3.21)

This package provides functions for interfacing with the Metabolomics Workbench RESTful API. Study, compound, protein and gene information can be searched for using the API. Methods to obtain study data in common Bioconductor formats such as SummarizedExperiment and MultiAssayExperiment are also included.

Author: Gavin Rhys Lloyd [aut, cre], Ralf Johannes Maria Weber [aut]

Maintainer: Gavin Rhys Lloyd <g.r.lloyd at bham.ac.uk>

Citation (from within R, enter citation("metabolomicsWorkbenchR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("metabolomicsWorkbenchR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metabolomicsWorkbenchR")
Details See More Suggests BiocStyle, covr, knitr, HDF5Array, httptest, rmarkdown, structToolbox, testthat, pmp, grid, png Linking To Enhances Depends On Me Imports Me Suggests Me fobitools, MetMashR Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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