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meshr

This is the released version of meshr; for the devel version, see meshr.

Tools for conducting enrichment analysis of MeSH

Bioconductor version: Release (3.21)

A set of annotation maps describing the entire MeSH assembled using data from MeSH.

Author: Koki Tsuyuzaki, Itoshi Nikaido, Gota Morota

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("meshr")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("meshr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("meshr")

AnnotationHub-style MeSH ORA Framework from BioC 3.14 HTML R Script Reference Manual PDF NEWS Text Details biocViews Annotation, AnnotationData, Bioinformatics, FunctionalAnnotation, MeSHDb, MultipleComparisons, Software, Statistics Version 2.14.0 In Bioconductor since BioC 2.14 (R-3.1) (11 years) License Artistic-2.0 Depends R (>= 4.1.0) Imports markdown, rmarkdown, BiocStyle, knitr, methods, stats, utils, fdrtool, MeSHDbi, Category, S4Vectors, BiocGenerics, RSQLite System Requirements URL Bug Reports https://github.com/rikenbit/meshr/issues See More Suggests Linking To Enhances Depends On Me Imports Me scTensor Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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