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Bioconductor - made4

made4

This is the released version of made4; for the devel version, see made4.

Multivariate analysis of microarray data using ADE4

Bioconductor version: Release (3.21)

Multivariate data analysis and graphical display of microarray data. Functions include for supervised dimension reduction (between group analysis) and joint dimension reduction of 2 datasets (coinertia analysis). It contains functions that require R package ade4.

Author: Aedin Culhane

Maintainer: Aedin Culhane <Aedin at jimmy.harvard.edu>

Citation (from within R, enter citation("made4")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("made4")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("made4")
Details biocViews Classification, Clustering, DimensionReduction, GeneExpression, Microarray, MultipleComparison, PrincipalComponent, Sequencing, Software, Transcriptomics Version 1.82.0 In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 20 years) License Artistic-2.0 Depends RColorBrewer, gplots, scatterplot3d, Biobase, SummarizedExperiment Imports ade4 System Requirements URL http://www.hsph.harvard.edu/aedin-culhane/ See More Package Archives

Follow Installation instructions to use this package in your R session.

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