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Bioconductor - flowPloidy

flowPloidy

This is the released version of flowPloidy; for the devel version, see flowPloidy.

Analyze flow cytometer data to determine sample ploidy

Bioconductor version: Release (3.21)

Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.

Author: Tyler Smith <tyler at plantarum.ca>

Maintainer: Tyler Smith <tyler at plantarum.ca>

Citation (from within R, enter citation("flowPloidy")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowPloidy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowPloidy")
Details biocViews FlowCytometry, GUI, Regression, Software, Visualization Version 1.34.0 In Bioconductor since BioC 3.4 (R-3.3) (8.5 years) License GPL-3 Depends Imports flowCore, car, caTools, knitr, rmarkdown, minpack.lm, shiny, methods, graphics, stats, utils System Requirements URL https://github.com/plantarum/flowPloidy Bug Reports https://github.com/plantarum/flowPloidy/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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