This is the released version of drugTargetInteractions; for the devel version, see drugTargetInteractions.
Drug-Target InteractionsBioconductor version: Release (3.21)
Provides utilities for identifying drug-target interactions for sets of small molecule or gene/protein identifiers. The required drug-target interaction information is obained from a local SQLite instance of the ChEMBL database. ChEMBL has been chosen for this purpose, because it provides one of the most comprehensive and best annotatated knowledge resources for drug-target information available in the public domain.
Author: Thomas Girke [cre, aut]
Maintainer: Thomas Girke <thomas.girke at ucr.edu>
Citation (from within R, entercitation("drugTargetInteractions")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("drugTargetInteractions")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("drugTargetInteractions")
Details biocViews BiomedicalInformatics, Cheminformatics, Metabolomics, Pharmacogenetics, Pharmacogenomics, Proteomics, Software Version 1.16.0 In Bioconductor since BioC 3.13 (R-4.1) (4 years) License Artistic-2.0 Depends methods, R (>= 4.1) Imports utils, RSQLite, UniProt.ws, biomaRt, ensembldb, BiocFileCache, dplyr, rappdirs, AnnotationFilter, S4Vectors System Requirements URL https://github.com/girke-lab/drugTargetInteractions Bug Reports https://github.com/girke-lab/drugTargetInteractions See More Package Archives
Follow Installation instructions to use this package in your R session.
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