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Bioconductor - UNDO

UNDO

This is the released version of UNDO; for the devel version, see UNDO.

Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions

Bioconductor version: Release (3.21)

UNDO is an R package for unsupervised deconvolution of tumor and stromal mixed expression data. It detects marker genes and deconvolutes the mixing expression data without any prior knowledge.

Author: Niya Wang <wangny at vt.edu>

Maintainer: Niya Wang <wangny at vt.edu>

Citation (from within R, enter citation("UNDO")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("UNDO")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("UNDO")
Details biocViews Software Version 1.50.0 In Bioconductor since BioC 2.14 (R-3.1) (11 years) License GPL-2 Depends R (>= 2.15.2), methods, BiocGenerics, Biobase Imports MASS, boot, nnls, stats, utils System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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