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RUVcorr

This is the released version of RUVcorr; for the devel version, see RUVcorr.

Removal of unwanted variation for gene-gene correlations and related analysis

Bioconductor version: Release (3.21)

RUVcorr allows to apply global removal of unwanted variation (ridged version of RUV) to real and simulated gene expression data.

Author: Saskia Freytag

Maintainer: Saskia Freytag <saskia.freytag at perkins.uwa.edu.au>

Citation (from within R, enter citation("RUVcorr")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RUVcorr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RUVcorr")

Details biocViews GeneExpression, Normalization, Software Version 1.40.0 In Bioconductor since BioC 3.1 (R-3.2) (10 years) License GPL-2 Depends Imports corrplot, MASS, stats, lattice, grDevices, gridExtra, snowfall, psych, BiocParallel, grid, bladderbatch, reshape2, graphics System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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