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Bioconductor - RUVSeq

RUVSeq

This is the released version of RUVSeq; for the devel version, see RUVSeq.

Remove Unwanted Variation from RNA-Seq Data

Bioconductor version: Release (3.21)

This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples.

Author: Davide Risso [aut, cre, cph], Sandrine Dudoit [aut], Lorena Pantano [ctb], Kamil Slowikowski [ctb]

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("RUVSeq")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RUVSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RUVSeq")
RUVSeq: Remove Unwanted Variation from RNA-Seq Data HTML R Script Reference Manual PDF NEWS Text Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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