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Bioconductor - PCAN

PCAN

This is the released version of PCAN; for the devel version, see PCAN.

Phenotype Consensus ANalysis (PCAN)

Bioconductor version: Release (3.21)

Phenotypes comparison based on a pathway consensus approach. Assess the relationship between candidate genes and a set of phenotypes based on additional genes related to the candidate (e.g. Pathways or network neighbors).

Author: Matthew Page and Patrice Godard

Maintainer: Matthew Page <matthew.page at ucb.com> and Patrice Godard <patrice.godard at gmail.com>

Citation (from within R, enter citation("PCAN")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PCAN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PCAN")
Assessing gene relevance for a set of phenotypes HTML R Script Reference Manual PDF Details See More Package Archives

Follow Installation instructions to use this package in your R session.

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