This is the released version of MetaCyto; for the devel version, see MetaCyto.
MetaCyto: A package for meta-analysis of cytometry dataBioconductor version: Release (3.21)
This package provides functions for preprocessing, automated gating and meta-analysis of cytometry data. It also provides functions that facilitate the collection of cytometry data from the ImmPort database.
Author: Zicheng Hu, Chethan Jujjavarapu, Sanchita Bhattacharya, Atul J. Butte
Maintainer: Zicheng Hu <zicheng.hu at ucsf.edu>
Citation (from within R, entercitation("MetaCyto")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MetaCyto")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MetaCyto")
Details biocViews CellBasedAssays, CellBiology, Clustering, FlowCytometry, ImmunoOncology, Preprocessing, Software, StatisticalMethod Version 1.30.0 In Bioconductor since BioC 3.6 (R-3.4) (7.5 years) License GPL (>= 2) Depends R (>= 3.4) Imports flowCore(>= 1.4), tidyr (>= 0.7), fastcluster, ggplot2, metafor, cluster, FlowSOM, grDevices, graphics, stats, utils System Requirements URL See More Package Archives
Follow Installation instructions to use this package in your R session.
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