This is the released version of MSstatsBioNet; for the devel version, see MSstatsBioNet.
Network Analysis for MS-based Proteomics ExperimentsBioconductor version: Release (3.21)
A set of tools for network analysis using mass spectrometry-based proteomics data and network databases. The package takes as input the output of MSstats differential abundance analysis and provides functions to perform enrichment analysis and visualization in the context of prior knowledge from past literature. Notably, this package integrates with INDRA, which is a database of biological networks extracted from the literature using text mining techniques.
Author: Anthony Wu [aut, cre], Olga Vitek [aut] ORCID: 0000-0003-1728-1104
Maintainer: Anthony Wu <wu.anthon at northeastern.edu>
Citation (from within R, entercitation("MSstatsBioNet")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MSstatsBioNet")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MSstatsBioNet")Follow Installation instructions to use this package in your R session.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4