This is the released version of MIRit; for the devel version, see MIRit.
Integrate microRNA and gene expression to decipher pathway complexityBioconductor version: Release (3.21)
MIRit is an R package that provides several methods for investigating the relationships between miRNAs and genes in different biological conditions. In particular, MIRit allows to explore the functions of dysregulated miRNAs, and makes it possible to identify miRNA-gene regulatory axes that control biological pathways, thus enabling the users to unveil the complexity of miRNA biology. MIRit is an all-in-one framework that aims to help researchers in all the central aspects of an integrative miRNA-mRNA analyses, from differential expression analysis to network characterization.
Author: Jacopo Ronchi [aut, cre] ORCID: 0000-0001-5520-4631 , Maria Foti [fnd] ORCID: 0000-0002-4481-1900
Maintainer: Jacopo Ronchi <jacopo.ronchi at unimib.it>
Citation (from within R, entercitation("MIRit")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MIRit")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MIRit")Follow Installation instructions to use this package in your R session.
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