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Bioconductor - MACSQuantifyR

MACSQuantifyR

This is the released version of MACSQuantifyR; for the devel version, see MACSQuantifyR.

Fast treatment of MACSQuantify FACS data

Bioconductor version: Release (3.21)

Automatically process the metadata of MACSQuantify FACS sorter. It runs multiple modules: i) imports of raw file and graphical selection of duplicates in well plate, ii) computes statistics on data and iii) can compute combination index.

Author: Raphaël Bonnet [aut, cre], Marielle Nebout [dtc],Giulia Biondani [dtc], Jean-François Peyron[aut,ths], Inserm [fnd]

Maintainer: Raphaël Bonnet <raphael.bonnet at univ-cotedazur.fr>

Citation (from within R, enter citation("MACSQuantifyR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MACSQuantifyR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MACSQuantifyR")
Details biocViews DataImport, DataRepresentation, FlowCytometry, GUI, Normalization, Preprocessing, Software Version 1.22.0 In Bioconductor since BioC 3.10 (R-3.6) (5.5 years) License Artistic-2.0 Depends Imports readxl, graphics, tools, utils, grDevices, ggplot2, ggrepel, methods, stats, latticeExtra, lattice, rmarkdown, png, grid, gridExtra, prettydoc, rvest, xml2 System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.


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