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Showing content from https://www.bioconductor.org/packages/release/bioc/html/GeneExpressionSignature.html below:

Bioconductor - GeneExpressionSignature

This is the released version of GeneExpressionSignature; for the devel version, see GeneExpressionSignature.

Bioconductor version: Release (3.21)

This package gives the implementations of the gene expression signature and its distance to each. Gene expression signature is represented as a list of genes whose expression is correlated with a biological state of interest. And its distance is defined using a nonparametric, rank-based pattern-matching strategy based on the Kolmogorov-Smirnov statistic. Gene expression signature and its distance can be used to detect similarities among the signatures of drugs, diseases, and biological states of interest.

Author: Yang Cao [aut, cre], Fei Li [ctb], Lu Han [ctb]

Maintainer: Yang Cao <yiluheihei at gmail.com>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GeneExpressionSignature")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneExpressionSignature")

Follow Installation instructions to use this package in your R session.

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