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Bioconductor - DNAcycP2

DNAcycP2

This is the released version of DNAcycP2; for the devel version, see DNAcycP2.

DNA Cyclizability Prediction

Bioconductor version: Release (3.21)

This package performs prediction of intrinsic cyclizability of of every 50-bp subsequence in a DNA sequence. The input could be a file either in FASTA or text format. The output will be the C-score, the estimated intrinsic cyclizability score for each 50 bp sequences in each entry of the sequence set.

Author: Ji-Ping Wang [aut, cre] ORCID: 0000-0002-8398-939X

Maintainer: Ji-Ping Wang <jzwang at northwestern.edu>

Citation (from within R, enter citation("DNAcycP2")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DNAcycP2")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DNAcycP2")
Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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