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Bioconductor - CardinalIO

CardinalIO

This is the released version of CardinalIO; for the devel version, see CardinalIO.

Read and write mass spectrometry imaging files

Bioconductor version: Release (3.21)

Fast and efficient reading and writing of mass spectrometry imaging data files. Supports imzML and Analyze 7.5 formats. Provides ontologies for mass spectrometry imaging.

Author: Kylie Ariel Bemis [aut, cre]

Maintainer: Kylie Ariel Bemis <k.bemis at northeastern.edu>

Citation (from within R, enter citation("CardinalIO")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CardinalIO")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CardinalIO")
Details biocViews DataImport, ImagingMassSpectrometry, Infrastructure, MassSpectrometry, Software Version 1.6.0 In Bioconductor since BioC 3.18 (R-4.3) (1.5 years) License Artistic-2.0 | file LICENSE Depends R (>= 4.4), BiocParallel, matter, ontologyIndex Imports methods, S4Vectors, stats, utils, tools System Requirements URL http://www.cardinalmsi.org Bug Reports https://github.com/kuwisdelu/CardinalIO/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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