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Bioconductor - BiocHubsShiny

BiocHubsShiny

This is the released version of BiocHubsShiny; for the devel version, see BiocHubsShiny.

View AnnotationHub and ExperimentHub Resources Interactively

Bioconductor version: Release (3.21)

A package that allows interactive exploration of AnnotationHub and ExperimentHub resources. It uses DT / DataTable to display resources for multiple organisms. It provides template code for reproducibility and for downloading resources via the indicated Hub package.

Author: Marcel Ramos [aut, cre] ORCID: 0000-0002-3242-0582 , Vincent Carey [ctb]

Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>

Citation (from within R, enter citation("BiocHubsShiny")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocHubsShiny")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocHubsShiny")

Details biocViews ShinyApps, Software Version 1.8.1 In Bioconductor since BioC 3.17 (R-4.3) (2 years) License Artistic-2.0 Depends R (>= 4.3.0), shiny Imports AnnotationHub, ExperimentHub, DT, htmlwidgets, rclipboard, S4Vectors, shinyAce, shinyjs, shinythemes, shinytoastr, utils System Requirements URL https://github.com/Bioconductor/BiocHubsShiny Bug Reports https://github.com/Bioconductor/BiocHubsShiny/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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