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Showing content from https://www.bioconductor.org/packages/release/bioc/html/BREW3R.r.html below:

Bioconductor - BREW3R.r

This is the released version of BREW3R.r; for the devel version, see BREW3R.r.

Bioconductor version: Release (3.21)

This R package provide functions that are used in the BREW3R workflow. This mainly contains a function that extend a gtf as GRanges using information from another gtf (also as GRanges). The process allows to extend gene annotation without increasing the overlap between gene ids.

Author: Lucille Lopez-Delisle [aut, cre] ORCID: 0000-0002-1964-4960

Maintainer: Lucille Lopez-Delisle <lucille.delisle at epfl.ch>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BREW3R.r")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BREW3R.r")

Follow Installation instructions to use this package in your R session.

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