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Bioconductor - AnVILWorkflow

AnVILWorkflow

This is the released version of AnVILWorkflow; for the devel version, see AnVILWorkflow.

Run workflows implemented in Terra/AnVIL workspace

Bioconductor version: Release (3.21)

The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The main cloud-based genomics platform deported by the AnVIL project is Terra. The AnVILWorkflow package allows remote access to Terra implemented workflows, enabling end-user to utilize Terra/ AnVIL provided resources - such as data, workflows, and flexible/scalble computing resources - through the conventional R functions.

Author: Sehyun Oh [aut, cre] ORCID: 0000-0002-9490-3061 , Marcel Ramos [ctb] ORCID: 0000-0002-3242-0582 , Kai Gravel-Pucillo [aut]

Maintainer: Sehyun Oh <shbrief at gmail.com>

Citation (from within R, enter citation("AnVILWorkflow")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AnVILWorkflow")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AnVILWorkflow")
Details biocViews Infrastructure, Software Version 1.8.0 In Bioconductor since BioC 3.17 (R-4.3) (2 years) License Artistic-2.0 Depends R (>= 4.4.0), AnVILGCP, AnVILBase, httr Imports AnVIL, dplyr, jsonlite, rlang, tibble, tidyr, utils, methods, plyr, stringr System Requirements URL https://github.com/shbrief/AnVILWorkflow Bug Reports https://github.com/shbrief/AnVILWorkflow/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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