This is the released version of macrophage; for the devel version, see macrophage.
Human macrophage immune responseBioconductor version: Release (3.21)
This package provides the output of running Salmon on a set of 24 RNA-seq samples from Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", published in Nature Genetics, January 2018. For details on version numbers and how the samples were processed see the package vignette.
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove at gmail.com>
Citation (from within R, entercitation("macrophage")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("macrophage")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("macrophage")
Salmon quantifications for human macrophage immune response experiment HTML R Script Reference Manual PDF Details See More Package Archives
Follow Installation instructions to use this package in your R session.
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