This is the released version of HiBED; for the devel version, see HiBED.
HiBEDBioconductor version: Release (3.21)
Hierarchical deconvolution for extensive cell type resolution in the human brain using DNA methylation. The HiBED deconvolution estimates proportions up to 7 cell types (GABAergic neurons, glutamatergic neurons, astrocytes, microglial cells, oligodendrocytes, endothelial cells, and stromal cells) in bulk brain tissues.
Author: Ze Zhang [cre, aut] ORCID: 0000-0001-9854-5823 , Lucas A. Salas [aut]
Maintainer: Ze Zhang <ze.zhang.gr at dartmouth.edu>
Citation (from within R, entercitation("HiBED")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HiBED")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HiBED")Follow Installation instructions to use this package in your R session.
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