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Bioconductor - sigFeature

sigFeature

This is the released version of sigFeature; for the devel version, see sigFeature.

sigFeature: Significant feature selection using SVM-RFE & t-statistic

Bioconductor version: Release (3.21)

This package provides a novel feature selection algorithm for binary classification using support vector machine recursive feature elimination SVM-RFE and t-statistic. In this feature selection process, the selected features are differentially significant between the two classes and also they are good classifier with higher degree of classification accuracy.

Author: Pijush Das Developer [aut, cre], Dr. Susanta Roychudhury User [ctb], Dr. Sucheta Tripathy User [ctb]

Maintainer: Pijush Das Developer <topijush at gmail.com>

Citation (from within R, enter citation("sigFeature")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sigFeature")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sigFeature")
Details biocViews Classification, FeatureExtraction, GeneExpression, GenePrediction, Microarray, Normalization, Software, SupportVectorMachine, Transcription, mRNAMicroarray Version 1.26.0 In Bioconductor since BioC 3.8 (R-3.5) (6.5 years) License GPL (>= 2) Depends R (>= 3.5.0) Imports biocViews, nlme, e1071, openxlsx, pheatmap, RColorBrewer, Matrix, SparseM, graphics, stats, utils, SummarizedExperiment, BiocParallel, methods System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.


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