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Bioconductor - globalSeq

globalSeq

This is the released version of globalSeq; for the devel version, see globalSeq.

Global Test for Counts

Bioconductor version: Release (3.21)

The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size. Useful for testing for association between RNA-Seq and high-dimensional data.

Author: Armin Rauschenberger [aut, cre]

Maintainer: Armin Rauschenberger <armin.rauschenberger at uni.lu>

Citation (from within R, enter citation("globalSeq")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("globalSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("globalSeq")
Details biocViews DifferentialExpression, DimensionReduction, ExomeSeq, ExonArray, GeneExpression, GenomeWideAssociation, MultipleComparison, RNASeq, Regression, Sequencing, Software, Transcriptomics, WholeGenome, miRNA Version 1.36.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL-3 Depends R (>= 3.0.0) Imports System Requirements URL https://github.com/rauschenberger/globalSeq Bug Reports https://github.com/rauschenberger/globalSeq/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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