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Bioconductor - flagme

flagme

This is the released version of flagme; for the devel version, see flagme.

Analysis of Metabolomics GC/MS Data

Bioconductor version: Release (3.21)

Fragment-level analysis of gas chromatography-massspectrometry metabolomics data.

Author: Mark Robinson <mark.robinson at imls.uzh.ch>, Riccardo Romoli <riccardo.romoli at unifi.it>

Maintainer: Mark Robinson <mark.robinson at imls.uzh.ch>, Riccardo Romoli <riccardo.romoli at unifi.it>

Citation (from within R, enter citation("flagme")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flagme")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flagme")
\texttt{flagme}: Fragment-level analysis of \\ GC-MS-based metabolomics data PDF R Script Using flagme -- Fragment-level analysis of GC-MS-based metabolomics data PDF R Script Reference Manual PDF NEWS Text Details biocViews DifferentialExpression, MassSpectrometry, Software Version 1.64.0 In Bioconductor since BioC 2.4 (R-2.9) (16 years) License LGPL (>= 2) Depends gcspikelite, xcms, CAMERA Imports gplots, graphics, MASS, methods, SparseM, stats, utils System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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