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Bioconductor - bayNorm

bayNorm

This is the released version of bayNorm; for the devel version, see bayNorm.

Single-cell RNA sequencing data normalization

Bioconductor version: Release (3.21)

bayNorm is used for normalizing single-cell RNA-seq data.

Author: Wenhao Tang [aut, cre], Fran<U+00E7>ois Bertaux [aut], Philipp Thomas [aut], Claire Stefanelli [aut], Malika Saint [aut], Samuel Marguerat [aut], Vahid Shahrezaei [aut]

Maintainer: Wenhao Tang <wt215 at ic.ac.uk>

Citation (from within R, enter citation("bayNorm")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("bayNorm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bayNorm")
Details biocViews ImmunoOncology, Normalization, RNASeq, Sequencing, SingleCell, Software Version 1.26.0 In Bioconductor since BioC 3.8 (R-3.5) (6.5 years) License GPL (>= 2) Depends R (>= 3.5) Imports Rcpp (>= 0.12.12), BB, foreach, iterators, doSNOW, Matrix, parallel, MASS, locfit, fitdistrplus, stats, methods, graphics, grDevices, SingleCellExperiment, SummarizedExperiment, BiocParallel, utils System Requirements URL https://github.com/WT215/bayNorm Bug Reports https://github.com/WT215/bayNorm/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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