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Bioconductor - PICS

PICS

This package is for version 3.21 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see PICS.

Probabilistic inference of ChIP-seq

Bioconductor version: Release (3.21)

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

Author: Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <rgottard at fhcrc.org>

Maintainer: Renan Sauteraud <renan.sauteraud at gmail.com>

Citation (from within R, enter citation("PICS")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PICS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PICS")
Details biocViews ChIPseq, Clustering, Sequencing, Software, Visualization Version 2.51.0 In Bioconductor since BioC 2.6 (R-2.11) (15 years) License Artistic-2.0 Depends R (>= 3.0.0) Imports utils, stats, graphics, grDevices, methods, IRanges, GenomicRanges, Rsamtools, GenomicAlignments System Requirements URL https://github.com/SRenan/PICS Bug Reports https://github.com/SRenan/PICS/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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