RetroSearch Browse

Showing content from https://www.bioconductor.org/packages/release/bioc/html/../../bioc/html/MinimumDistance.html below:

MinimumDistance

This is the released version of MinimumDistance; for the devel version, see MinimumDistance.

A Package for De Novo CNV Detection in Case-Parent Trios

Bioconductor version: Release (3.21)

Analysis of de novo copy number variants in trios from high-dimensional genotyping platforms.

Author: Robert B Scharpf and Ingo Ruczinski

Maintainer: Robert Scharpf <rscharpf at jhu.edu>

Citation (from within R, enter citation("MinimumDistance")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MinimumDistance")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MinimumDistance")

Detection of de novo copy number alterations in case-parent trios PDF R Script Reference Manual PDF NEWS Text Details biocViews CopyNumberVariation, Microarray, SNP, Software Version 1.52.1 In Bioconductor since BioC 2.10 (R-2.15) (13.5 years) License Artistic-2.0 Depends R (>= 3.5.0), VanillaICE(>= 1.47.1) Imports methods, BiocGenerics, MatrixGenerics, Biobase, S4Vectors(>= 0.23.18), IRanges, GenomeInfoDb, GenomicRanges(>= 1.17.16), SummarizedExperiment(>= 1.15.4), oligoClasses, DNAcopy, ff, foreach, matrixStats, lattice, data.table, grid, stats, utils System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4