This is the released version of sechm; for the devel version, see sechm.
sechm: Complex Heatmaps from a SummarizedExperimentBioconductor version: Release (3.21)
sechm provides a simple interface between SummarizedExperiment objects and the ComplexHeatmap package. It enables plotting annotated heatmaps from SE objects, with easy access to rowData and colData columns, and implements a number of features to make the generation of heatmaps easier and more flexible. These functionalities used to be part of the SEtools package.
Author: Pierre-Luc Germain [cre, aut] ORCID: 0000-0003-3418-4218
Maintainer: Pierre-Luc Germain <pierre-luc.germain at hest.ethz.ch>
Citation (from within R, entercitation("sechm")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("sechm")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("sechm")Follow Installation instructions to use this package in your R session.
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