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mpra

This is the released version of mpra; for the devel version, see mpra.

Analyze massively parallel reporter assays

Bioconductor version: Release (3.21)

Tools for data management, count preprocessing, and differential analysis in massively parallel report assays (MPRA).

Author: Leslie Myint [cre, aut], Kasper D. Hansen [aut]

Maintainer: Leslie Myint <leslie.myint at gmail.com>

Citation (from within R, enter citation("mpra")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mpra")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mpra")

Details biocViews FunctionalGenomics, GeneRegulation, Sequencing, Software Version 1.30.1 In Bioconductor since BioC 3.6 (R-3.4) (7.5 years) License Artistic-2.0 Depends R (>= 3.5.0), methods, BiocGenerics, SummarizedExperiment, limma Imports S4Vectors, scales, stats, graphics, statmod System Requirements URL https://github.com/hansenlab/mpra Bug Reports https://github.com/hansenlab/mpra/issues See More Package Archives

Follow Installation instructions to use this package in your R session.

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