This is the released version of RSVSim; for the devel version, see RSVSim.
RSVSim: an R/Bioconductor package for the simulation of structural variationsBioconductor version: Release (3.21)
RSVSim is a package for the simulation of deletions, insertions, inversion, tandem-duplications and translocations of various sizes in any genome available as FASTA-file or BSgenome data package. SV breakpoints can be placed uniformly accross the whole genome, with a bias towards repeat regions and regions of high homology (for hg19) or at user-supplied coordinates.
Author: Christoph Bartenhagen
Maintainer: Christoph Bartenhagen <c.bartenhagen at uni-koeln.de>
Citation (from within R, entercitation("RSVSim")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RSVSim")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RSVSim")Follow Installation instructions to use this package in your R session.
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