This is the released version of GNOSIS; for the devel version, see GNOSIS.
Genomics explorer using statistical and survival analysis in RBioconductor version: Release (3.21)
GNOSIS incorporates a range of R packages enabling users to efficiently explore and visualise clinical and genomic data obtained from cBioPortal. GNOSIS uses an intuitive GUI and multiple tab panels supporting a range of functionalities. These include data upload and initial exploration, data recoding and subsetting, multiple visualisations, survival analysis, statistical analysis and mutation analysis, in addition to facilitating reproducible research.
Author: Lydia King [aut, cre] ORCID: 0000-0002-0696-9811 , Marcel Ramos [ctb]
Maintainer: Lydia King <l.king18 at universityofgalway.ie>
Citation (from within R, entercitation("GNOSIS")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GNOSIS")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GNOSIS")Follow Installation instructions to use this package in your R session.
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