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EBSeq

This is the released version of EBSeq; for the devel version, see EBSeq.

An R package for gene and isoform differential expression analysis of RNA-seq data

Bioconductor version: Release (3.21)

Differential Expression analysis at both gene and isoform level using RNA-seq data

Author: Xiuyu Ma [cre, aut], Ning Leng [aut], Christina Kendziorski [ctb], Michael A. Newton [ctb]

Maintainer: Xiuyu Ma <watsonforfun at gmail.com>

Citation (from within R, enter citation("EBSeq")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBSeq")

Details biocViews DifferentialExpression, ImmunoOncology, MultipleComparison, RNASeq, Sequencing, Software, StatisticalMethod Version 2.6.0 In Bioconductor since BioC 2.13 (R-3.0) (11.5 years) License Artistic-2.0 Depends blockmodeling, gplots, testthat, R (>= 3.0.0) Imports Rcpp (>= 0.12.11), RcppEigen (>= 0.3.2.9.0), BH (<= 1.87.0-1) System Requirements c++14 URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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