This is the development version of NanoStringNCTools; for the stable release version, see NanoStringNCTools.
NanoString nCounter ToolsBioconductor version: Development (3.22)
Tools for NanoString Technologies nCounter Technology. Provides support for reading RCC files into an ExpressionSet derived object. Also includes methods for QC and normalizaztion of NanoString data.
Author: Patrick Aboyoun [aut], Nicole Ortogero [aut], Maddy Griswold [cre], Zhi Yang [ctb]
Maintainer: Maddy Griswold <mgriswold at nanostring.com>
Citation (from within R, entercitation("NanoStringNCTools")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("NanoStringNCTools")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NanoStringNCTools")
Details biocViews CellBasedAssays, DataImport, GeneExpression, ProprietaryPlatforms, Proteomics, RNASeq, Software, Transcription, Transcriptomics, mRNAMicroarray Version 1.17.1 In Bioconductor since BioC 3.13 (R-4.1) (4 years) License MIT Depends R (>= 3.6), Biobase, S4Vectors, ggplot2 Imports BiocGenerics, Biostrings, ggbeeswarm, ggiraph, ggthemes, grDevices, IRanges, methods, pheatmap, RColorBrewer, stats, utils System Requirements URL See More Package Archives
Follow Installation instructions to use this package in your R session.
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