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Bioconductor - CMA (development version)

CMA

This is the development version of CMA; for the stable release version, see CMA.

Synthesis of microarray-based classification

Bioconductor version: Development (3.22)

This package provides a comprehensive collection of various microarray-based classification algorithms both from Machine Learning and Statistics. Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed combined or stepwise in a user-friendly environment.

Author: Martin Slawski <ms at cs.uni-sb.de>, Anne-Laure Boulesteix <boulesteix at ibe.med.uni-muenchen.de>, Christoph Bernau <bernau at ibe.med.uni-muenchen.de>.

Maintainer: Roman Hornung <hornung at ibe.med.uni-muenchen.de>

Citation (from within R, enter citation("CMA")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("CMA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CMA")
Details biocViews Classification, DecisionTree, Software Version 1.67.0 In Bioconductor since BioC 2.3 (R-2.8) (16.5 years) License GPL (>= 2) Depends R (>= 2.10), methods, stats, Biobase Imports System Requirements URL See More Suggests MASS, class, nnet, glmnet, e1071, randomForest, plsgenomics, gbm, mgcv, corpcor, limma, st, mvtnorm Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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