This is the development version of scMultiome; for the stable release version, see scMultiome.
Collection of Public Single-Cell Multiome (scATAC + scRNAseq) DatasetsBioconductor version: Development (3.22)
Single cell multiome data, containing chromatin accessibility (scATAC-seq) and gene expression (scRNA-seq) information analyzed with the ArchR package and presented as MultiAssayExperiment objects.
Author: Xiaosai Yao [cre, aut] ORCID: 0000-0001-9729-0726 , Aleksander Chlebowski [aut], Aaron Lun [aut], Shiqi Xie [ctb], Tomasz WÅodarczyk [aut]
Maintainer: Xiaosai Yao <xiaosai.yao at gmail.com>
Citation (from within R, entercitation("scMultiome")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("scMultiome")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("scMultiome")Follow Installation instructions to use this package in your R session.
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