This is the development version of RNAseqData.HNRNPC.bam.chr14; for the stable release version, see RNAseqData.HNRNPC.bam.chr14.
Aligned reads from RNAseq experiment: Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cellsBioconductor version: Development (3.22)
The package contains 8 BAM files, 1 per sequencing run. Each BAM file was obtained by (1) aligning the reads (paired-end) to the full hg19 genome with TopHat2, and then (2) subsetting to keep only alignments on chr14. See accession number E-MTAB-1147 in the ArrayExpress database for details about the experiment, including links to the published study (by Zarnack et al., 2012) and to the FASTQ files.
Author: Hervé Pagès
Maintainer: Hervé Pagès <hpages.on.github at gmail.com>
Citation (from within R, entercitation("RNAseqData.HNRNPC.bam.chr14")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("RNAseqData.HNRNPC.bam.chr14")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Package ArchivesFollow Installation instructions to use this package in your R session.
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