This is the development version of PCHiCdata; for the stable release version, see PCHiCdata.
Promoter Capture Hi-C dataBioconductor version: Development (3.22)
Subsets of Promoter Capture Hi-C data conveniently packaged for Chicago users. Data includes interactions detected for chromosomes 20 and 21 in GM12878 cells and for chromosomes 18 and 19 in mESC.
Author: Paula Freire-Pritchett, Jonathan Cairns, Steven Wingett, Mikhail Spivakov
Maintainer: Mikhail Spivakov <mikhail.spivakov at lms.mrc.ac.uk>
Citation (from within R, entercitation("PCHiCdata")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("PCHiCdata")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PCHiCdata")
Details See More Package Archives
Follow Installation instructions to use this package in your R session.
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