This is the development version of MouseGastrulationData; for the stable release version, see MouseGastrulationData.
Single-Cell -omics Data across Mouse Gastrulation and Early OrganogenesisBioconductor version: Development (3.22)
Provides processed and raw count data for single-cell RNA sequencing, single-cell ATAC-seq, and seqFISH (spatial transcriptomic) experiments performed along a timecourse of mouse gastrulation and early organogenesis.
Author: Jonathan Griffiths [aut, cre], Aaron Lun [aut]
Maintainer: Jonathan Griffiths <jonathan.griffiths.94 at gmail.com>
Citation (from within R, entercitation("MouseGastrulationData")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MouseGastrulationData")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MouseGastrulationData")
Details biocViews ExperimentData, ExperimentHub, ExpressionData, Mus_musculus_Data, RNASeqData, SequencingData, SingleCellData Version 1.23.0 License GPL-3 Depends R (>= 4.1), SingleCellExperiment, SummarizedExperiment, SpatialExperiment Imports methods, ExperimentHub, BiocGenerics, S4Vectors, BumpyMatrix System Requirements URL https://github.com/MarioniLab/MouseGastrulationData Bug Reports https://github.com/MarioniLab/MouseGastrulationData/issues See More Package Archives
Follow Installation instructions to use this package in your R session.
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