This is the development version of ConnectivityMap; for the stable release version, see ConnectivityMap.
Functional connections between drugs, genes and diseases as revealed by common gene-expression changesBioconductor version: Development (3.22)
The Broad Institute's Connectivity Map (cmap02) is a "large reference catalogue of gene-expression data from cultured human cells perturbed with many chemicals and genetic reagents", containing more than 7000 gene expression profiles and 1300 small molecules.
Author: Paul Shannon
Maintainer: Paul Shannon<pshannon at systemsbiology.org>
Citation (from within R, entercitation("ConnectivityMap")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("ConnectivityMap")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Package ArchivesFollow Installation instructions to use this package in your R session.
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