This is the development version of seqc; for the stable release version, see seqc.
RNA-seq data generated from SEQC (MAQC-III) studyBioconductor version: Development (3.22)
The SEQC/MAQC-III Consortium has produced benchmark RNA-seq data for the assessment of RNA sequencing technologies and data analysis methods (Nat Biotechnol, 2014). Billions of sequence reads have been generated from ten different sequencing sites. This package contains the summarized read count data for ~2000 sequencing libraries. It also includes all the exon-exon junctions discovered from the study. TaqMan RT-PCR data for ~1000 genes and ERCC spike-in sequence data are included in this package as well.
Author: Yang Liao and Wei Shi with contributions from Gordon K Smyth and Steve Lianoglou.
Maintainer: Yang Liao <Yang.Liao at onjcri.org.au> and Wei Shi <Wei.Shi at onjcri.org.au>
Citation (from within R, entercitation("seqc")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("seqc")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("seqc")Follow Installation instructions to use this package in your R session.
Source Package seqc_1.43.0.tar.gz Windows Binary (x86_64) macOS Binary (x86_64) macOS Binary (arm64) Source Repository git clone https://git.bioconductor.org/packages/seqc Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/seqc Package Short Url https://bioconductor.org/packages/seqc/ Package Downloads Report Download StatsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4