This is the development version of WGSmapp; for the stable release version, see WGSmapp.
Mappability tracks of Whole-genome Sequencing from the ENCODE ProjectBioconductor version: Development (3.22)
This package provides whole-genome mappability tracks on human hg19/hg38 assembly. We employed the 100-mers mappability track from the ENCODE Project and computed weighted average of the mappability scores if multiple ENCODE regions overlap with the same bin. âBlacklistâ bins, including segmental duplication regions and gaps in reference assembly from telomere, centromere, and/or heterochromatin regions are included. The dataset consists of three assembled .bam files of single-cell whole genome sequencing from 10X for illustration purposes.
Author: Rujin Wang
Maintainer: Rujin Wang <rujin at email.unc.edu>
Citation (from within R, entercitation("WGSmapp")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("WGSmapp")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me SCOPE Links To Me Build Report Build Report Package ArchivesFollow Installation instructions to use this package in your R session.
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