This is the development version of LungCancerACvsSCCGEO; for the stable release version, see LungCancerACvsSCCGEO.
A lung cancer dataset that can be used with maPredictDSC package for developing outcome prediction models from Affymetrix CEL files.Bioconductor version: Development (3.22)
This package contains 30 Affymetrix CEL files for 7 Adenocarcinoma (AC) and 8 Squamous cell carcinoma (SCC) lung cancer samples taken at random from 3 GEO datasets (GSE10245, GSE18842 and GSE2109) and other 15 samples from a dataset produced by the organizers of the IMPROVER Diagnostic Signature Challenge available from GEO (GSE43580).
Author: Adi Laurentiu Tarca <atarca at med.wayne.edu>
Maintainer: Adi Laurentiu Tarca <atarca at med.wayne.edu>
Citation (from within R, entercitation("LungCancerACvsSCCGEO")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("LungCancerACvsSCCGEO")
For older versions of R, please refer to the appropriate Bioconductor release.
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