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Bioconductor - FANTOM3and4CAGE (development version)

FANTOM3and4CAGE

This is the development version of FANTOM3and4CAGE; for the stable release version, see FANTOM3and4CAGE.

CAGE data from FANTOM3 and FANTOM4 projects

Bioconductor version: Development (3.22)

CAGE (Cap Analysis Gene Expression) data from FANTOM3 and FANTOM4 projects produced by RIKEN Omics Science Center.

Author: Vanja Haberle, Department of Biology, University of Bergen, Norway <vanja.haberle at bio.uib.no>

Maintainer: Vanja Haberle <vanja.haberle at bio.uib.no>

Citation (from within R, enter citation("FANTOM3and4CAGE")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("FANTOM3and4CAGE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FANTOM3and4CAGE")
Details biocViews ExperimentData, Tissue Version 1.45.0 License GPL-3 Depends R (>= 2.15.0) Imports System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me CAGEr Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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