This is the development version of EGSEAdata; for the stable release version, see EGSEAdata.
Gene set collections for the EGSEA packageBioconductor version: Development (3.22)
This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.
Author: Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth
Maintainer: Monther Alhamdoosh <m.hamdoosh at gmail.com>
Citation (from within R, entercitation("EGSEAdata")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("EGSEAdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation Details See More Suggests EGSEA Linking To Enhances Depends On Me Imports Me EGSEA Suggests Me Links To Me Build Report Build Report Package ArchivesFollow Installation instructions to use this package in your R session.
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